Accession
MI0041217
Description
Loxodonta africana
laf-mir-542 precursor miRNA
Sequence
ggggucaaggaugcacagaccucagacauuUCGGGGAUCAUCAUGUCACGAGauaccacugugcacuUGUGACAGAUUGAUAACUGAAAggucugggagccacucaucuucguagcaau
.......((((((....(..(((((((.((((((..((((...(((((((((.(((....)))..)))))))))...))))..)))))).)))))))..)....)))))).........
.......((((((....(..(((((((.((((((..((((...(((((((((.(((....)))..)))))))))...))))..)))))).)))))))..)....)))))).........
Structure
--gggguca caca ac a GG UCA -a c
aggaug g cucagac uuUCGG AUCA UGUCACGAG uac a
|||||| | ||||||| |||||| |||| ||||||||| |||
uucuac c gggucug AAAGUC UAGU ACAGUGUuc gug c
uaacgaugc ucac ga g AA UAG ac u
Annotation confidence
Not enough data
Do you think this miRNA is real?
Genome context
GL010127.1: 4458476-4458534 []
Clustered miRNAs
3 other miRNAs are < 10 kb from laf-mir-542
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature laf-miR-542-5p
| Accession | MIMAT0061907 |
| Description | Loxodonta africana laf-miR-542-5p mature miRNA |
| Sequence | 31 - UCGGGGAUCAUCAUGUCACGAG - 52 |
| Evidence | not_experimental |
Mature laf-miR-542-3p
| Accession | MIMAT0061906 |
| Description | Loxodonta africana laf-miR-542-3p mature miRNA |
| Sequence | 68 - UGUGACAGAUUGAUAACUGAAA - 89 |
| Evidence | not_experimental |
References
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