Accession
MI0041281
Description
Loxodonta africana
laf-mir-221 precursor miRNA
Sequence
gcagacagaacauccaggucuggggcgugaACCUGGCAUACAAUGUAGAUUUCUGUguuuguugggcaacAGCUACAUUGUCUGCUGGGUUUCaggcuaccuggaaacacauucuucauggcc
(.(((.......(((((((....(((.(((((((((((.(((((((((....((((((((...)))).))))))))))))).))))))).)))).)))))))))).......))).)......
(.(((.......(((((((....(((.(((((((((((.(((((((((....((((((((...)))).))))))))))))).))))))).)))).)))))))))).......))).)......
Structure
------ c cagaaca cugg g - U AUUU - g
g aga uccaggu ggc ugaA CCUGGCA ACAAUGUAG CUGU guuu
| ||| ||||||| ||| |||| ||||||| ||||||||| |||| |||| u
c ucu aggucca ucg aCUU GGGUCGU UGUUACAUC GAca cggg
ccggua u uacacaa ---- g U C ---- a u
Annotation confidence
Not enough data
Do you think this miRNA is real?
Genome context
GL010083.1: 5382008-5382071 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from laf-mir-221
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature laf-miR-221-5p
| Accession | MIMAT0062030 |
| Description | Loxodonta africana laf-miR-221-5p mature miRNA |
| Sequence | 31 - ACCUGGCAUACAAUGUAGAUUUCUGU - 56 |
| Evidence | not_experimental |
Mature laf-miR-221-3p
| Accession | MIMAT0062029 |
| Description | Loxodonta africana laf-miR-221-3p mature miRNA |
| Sequence | 71 - AGCUACAUUGUCUGCUGGGUUUC - 93 |
| Evidence | not_experimental |
References
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