Stem-loop laf-mir-496

Accession

MI0041335

Description

Loxodonta africana laf-mir-496 precursor miRNA

Sequence

gcgagcaccacagucagguacuugaauggaGGUUGUCCAUGAUGUGUUCAUUuuauuuaugaUGAGUAUUACAUGGCCAAUCUCcuuucaguaccacauucuucuugggaaaac
.......(((.((...((((((.(((.((((((((.(((((..(((((((((........)))))))))..))))).)))))))).))))))))).....))...)))......

Structure

gcgagca   --c  --uca      u   u        U     AU         uua 
       cca   ag     gguacu gaa ggaGGUUG CCAUG  GUGUUCAUU   u
       |||   ||     |||||| ||| |||||||| |||||  |||||||||    
       ggu   uc     ccauga cuu cCUCUAAC GGUAC  UAUGAGUag   u
-caaaag   ucu  uuaca      -   u        C     AU         uau 

Annotation confidence Not enough data

Genome context

GL010036.1: 75562213-75562271 []

Clustered miRNAs

31 other miRNAs are < 10 kb from laf-mir-496

Mature laf-miR-496-5p

• Accession: MIMAT0062132
• Description: Loxodonta africana laf-miR-496-5p mature miRNA
• Sequence: 31 - GGUUGUCCAUGAUGUGUUCAUU - 52
• Evidence: not_experimental

Mature laf-miR-496-3p

• Accession: MIMAT0062131
• Description: Loxodonta africana laf-miR-496-3p mature miRNA
• Sequence: 63 - UGAGUAUUACAUGGCCAAUCUC - 84
• Evidence: not_experimental

References