Accession
MI0041344
Description
Loxodonta africana
laf-mir-539 precursor miRNA
Sequence
uuccagucagugcugcuguuucauacccgaGGACAAAUUAUCCGUGGUGUGUUGccuuuauucacguucaAUCAUACAAGGACAGUUGCUUUUUgaguaucaaauccugccuagguggacuucc
.((((.(.((.((....((((.((((.((((((..((((.(((...((((((((..............))).)))))..))).))))..)))))).)))).))))...)))).).)))).....
.((((.(.((.((....((((.((((.((((((..((((.(((...((((((((..............))).)))))..))).))))..)))))).)))).))))...)))).).)))).....
Structure
----u g c u ugcu c c CA A GUG - ccuuua
ucca u ag gc guuu auac cgaGGA AAUU UCC GUGUG UUG u
|||| | || || |||| |||| |||||| |||| ||| ||||| |||
aggu g uc cg uaaa uaug gUUUUU UUGA AGG CAUAC Aac u
ccuuc g a - -ucc c a CG C -AA U uugcac
Annotation confidence
Not enough data
Do you think this miRNA is real?
Genome context
GL010036.1: 75562213-75562271 []
Clustered miRNAs
31 other miRNAs are < 10 kb from laf-mir-539
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature laf-miR-539-5p
| Accession | MIMAT0062150 |
| Description | Loxodonta africana laf-miR-539-5p mature miRNA |
| Sequence | 31 - GGACAAAUUAUCCGUGGUGUGUUG - 54 |
| Evidence | not_experimental |
Mature laf-miR-539-3p
| Accession | MIMAT0062149 |
| Description | Loxodonta africana laf-miR-539-3p mature miRNA |
| Sequence | 71 - AUCAUACAAGGACAGUUGCUUUUU - 94 |
| Evidence | not_experimental |
References
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