Stem-loop laf-mir-543

Accession

MI0041350

Description

Loxodonta africana laf-mir-543 precursor miRNA

Sequence

cguugcucaucgacuugcgguacuuaaugaGAAGUUGCCCGUGUUUUUUUCGcuuaaucugugacgAAACAUUCGCGGUGCACUUCUUuuucaguauccaauucugccucgaggaugu
.((((.....)))).((.((((((.((.(((((((.(((((((..(.((((((.........).))))).)..))))).))))))))).)).))))))))(((((......)))))..

Structure

---cguugcucaucgacu  c      u  u       U  -     UU U     - uua 
                  ug gguacu aa gaGAAGU GC CCGUG  U UUUCG c   a
                  || |||||| || ||||||| || |||||  | ||||| |   u
                  ac cuauga uu UUCUUCA CG GGCGC  A AAAgc g   c
uguaggagcuccgucuua  -      c  u       -  U     UU C     a ugu 

Annotation confidence Not enough data

Genome context

GL010036.1: 75562213-75562271 []

Clustered miRNAs

31 other miRNAs are < 10 kb from laf-mir-543

Mature laf-miR-543-5p

• Accession: MIMAT0062162
• Description: Loxodonta africana laf-miR-543-5p mature miRNA
• Sequence: 31 - GAAGUUGCCCGUGUUUUUUUCG - 52
• Evidence: not_experimental

Mature laf-miR-543-3p

• Accession: MIMAT0062161
• Description: Loxodonta africana laf-miR-543-3p mature miRNA
• Sequence: 67 - AAACAUUCGCGGUGCACUUCUU - 88
• Evidence: not_experimental

References