Accession
MI0041380
Description
Loxodonta africana
laf-mir-138-1 precursor miRNA
Sequence
ccacgaccuucuggcauggugcgguggggcAGCUGGUGUUGUGAAUCAGGCCGuugccaaugagagaacgGCUACUUCACAACACCAGGGUCgcacuccaccacaggcagcgcuccaggcu
..........(((.(.(((((.((((.(((..(((((((((((((...(((((((..(.....)..)))))))..))))))))))))).))).)))).)))))..).))).(((...))).
..........(((.(.(((((.((((.(((..(((((((((((((...(((((((..(.....)..)))))))..))))))))))))).))).)))).)))))..).))).(((...))).
Structure
-ccacgaccuu g -a c g AG UCA gc a
cug c uggug ggug ggc CUGGUGUUGUGAA GGCCGuu c a
||| | ||||| |||| ||| ||||||||||||| ||||||| | u
gac g accac ucac CUG GACCACAACACUU UCGgcaa g g
ucggaccucgc g ac c g -G -CA ga a
Annotation confidence
Not enough data
Do you think this miRNA is real?
Genome context
GL010039.1: 23228294-23228354 []
Clustered miRNAs
1 other miRNA is < 10 kb from laf-mir-138-1
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature laf-miR-138-5p
| Accession | MIMAT0062218 |
| Description | Loxodonta africana laf-miR-138-5p mature miRNA |
| Sequence | 31 - AGCUGGUGUUGUGAAUCAGGCCG - 53 |
| Evidence | not_experimental |
Mature laf-miR-138-1-3p
| Accession | MIMAT0062220 |
| Description | Loxodonta africana laf-miR-138-1-3p mature miRNA |
| Sequence | 71 - GCUACUUCACAACACCAGGGUC - 92 |
| Evidence | not_experimental |
References
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