Stem-loop laf-mir-135a-1

Accession

MI0041385

Description

Loxodonta africana laf-mir-135a-1 precursor miRNA

Sequence

gcaggagcaggcccaggccucgcuguucucUAUGGCUUUUUAUUCCUAUGUGAuucuacugcucacucAUAUAGGGAUUGGAGCCGUGGCgcacggcgggggcagccagcggagggcucu
((....((.(((...(.(((((((((.(.((((((((((..((((((((((((.............)))))))))))).)))))))))).).))))))))).).))).)).....))...

Structure

---  -agga  a   cca g         u u          UU            uucua 
   gc     gc ggc   g ccucgcugu c cUAUGGCUUU  AUUCCUAUGUGA     c
   ||     || |||   | ||||||||| | ||||||||||  ||||||||||||     u
   cg     cg ccg   c ggggcggca g GGUGCCGAGG  UAGGGAUAUAcu     g
ucu  ggagg  a   --a g         c C          -U            cacuc 

Annotation confidence Not enough data

Genome context

GL010039.1: 15324288-15324347 [+]

Clustered miRNAs

2 other miRNAs are < 10 kb from laf-mir-135a-1

Mature laf-miR-135a-5p

• Accession: MIMAT0062227
• Description: Loxodonta africana laf-miR-135a-5p mature miRNA
• Sequence: 31 - UAUGGCUUUUUAUUCCUAUGUGA - 53
• Evidence: not_experimental

Mature laf-miR-135a-1-3p

• Accession: MIMAT0062229
• Description: Loxodonta africana laf-miR-135a-1-3p mature miRNA
• Sequence: 69 - AUAUAGGGAUUGGAGCCGUGGC - 90
• Evidence: not_experimental

References