Stem-loop laf-mir-107

Accession

MI0041407

Description

Loxodonta africana laf-mir-107 precursor miRNA

Sequence

cuugagacagucgauauucucucugcuuuCAGCUUCUUUACAGUGUUGCCUUGuggcauggaguucaAGCAGCAUUGUACAGGGCUAUCaaagcauagagagcuugcugcagccgaggu
((((.(.(((.(((..((((((.((((((.((((.((.(((((((((((.(((.(((.....))))))))))))))))).))))))...)))))).)))))).)))))))...))))..

Structure

--    --a a   u   ua      c      --C    U  U           C   u   a 
  cuug   g cag cga  uucucu ugcuuu   AGCU CU UACAGUGUUGC UUG ggc u
  ||||   | ||| |||  |||||| ||||||   |||| || ||||||||||| ||| ||| g
  gagc   c guc guu  gagaga acgaaa   UCGG GA AUGUUACGACG Aac uug g
ug    cga -   -   -c      u      CUA    -  C           -   -   a 

Annotation confidence Not enough data

Genome context

GL010037.1: 29028297-29028355 [+]

Clustered miRNAs

2 other miRNAs are < 10 kb from laf-mir-107

Mature laf-miR-107-5p

• Accession: MIMAT0062266
• Description: Loxodonta africana laf-miR-107-5p mature miRNA
• Sequence: 30 - CAGCUUCUUUACAGUGUUGCCUUG - 53
• Evidence: not_experimental

Mature laf-miR-107-3p

• Accession: MIMAT0062265
• Description: Loxodonta africana laf-miR-107-3p mature miRNA
• Sequence: 68 - AGCAGCAUUGUACAGGGCUAUC - 89
• Evidence: not_experimental

References