miRBase entry: laf-mir-33b

Stem-loop laf-mir-33b


Accession
MI0041424
Description
Loxodonta africana laf-mir-33b precursor miRNA


Sequence


ugggggccuggagaggcgggcggccccgagGUGCAUUGCUGUUGCAUUGCAcguguguggcgggugCAGUGCCUCAGCAGUGCAGCCCggggccagccccuggcgccgcggguggcc
.....((((....))))(((((((((((.((((((((((((..(((((((((.(((...))).)))))))))..)))))))))).))))))))).))))..(.((((...)))).).

Structure
-ugggggccuggagaggc    -       a  -          UU         g   g 
                  gggc ggccccg gG UGCAUUGCUG  GCAUUGCAc ugu  
                  |||| ||||||| || ||||||||||  ||||||||| ||| u
                  cccg ccggggC CC ACGUGACGAC  CGUGACgug gcg  
ccggugggcgccgcgguc    a       -  G          UC         g   g 


Annotation confidence Not enough data
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Genome context
GL010123.1: 2518915-2518971 []
Clustered miRNAs
1 other miRNA is < 10 kb from laf-mir-33b
Name Accession Chromosome Start End Strand Confidence




Database links

Mature laf-miR-33b-5p

Accession MIMAT0062298
Description Loxodonta africana laf-miR-33b-5p mature miRNA
Sequence 31 - GUGCAUUGCUGUUGCAUUGCA - 51
Evidence not_experimental

Mature laf-miR-33b-3p

Accession MIMAT0062299
Description Loxodonta africana laf-miR-33b-3p mature miRNA
Sequence 67 - CAGUGCCUCAGCAGUGCAGCCC - 88
Evidence not_experimental

References