Stem-loop laf-mir-18-1

Accession

MI0041456

Description

Loxodonta africana laf-mir-18-1 precursor miRNA

Sequence

gggccugcuggugucgagugcuuuuuguucUAAGGUGCAUCUAGUGCAGAUAGugaaguagauuagcaucuACUGCCCUAAGUGCUCCUUCUGGCauaagaaguuauguuuucauccaauaauuc
........(((((..((..(((((((((.((((((.((((.(((.((((.(((((..(.....)..)).))))))).))).)))).)))..))).)))))))))....))..)).))).......

Structure

gggccugc   -  uc  --gu         u   --   U    C   U    A   -  aa u 
        ugg ug  ga    gcuuuuugu cUA  AGG GCAU UAG GCAG UAG ug  g a
        ||| ||  ||    ||||||||| |||  ||| |||| ||| |||| ||| ||  | g
        acc ac  uu    ugaagaaua GGU  UCC CGUG AUC CGUC Auc ac  u a
-cuuaaua   u  uu  guau         C   CU   U    A   C    -   u  ga u 

Annotation confidence Not enough data

Genome context

GL010038.1: 14397164-14397223 []

Clustered miRNAs

15 other miRNAs are < 10 kb from laf-mir-18-1

Mature laf-miR-18-1-5p

• Accession: MIMAT0062358
• Description: Loxodonta africana laf-miR-18-1-5p mature miRNA
• Sequence: 31 - UAAGGUGCAUCUAGUGCAGAUAG - 53
• Evidence: not_experimental

Mature laf-miR-18-3p

• Accession: MIMAT0062356
• Description: Loxodonta africana laf-miR-18-3p mature miRNA
• Sequence: 72 - ACUGCCCUAAGUGCUCCUUCUGGC - 95
• Evidence: not_experimental

References