Stem-loop laf-mir-17-1

Accession

MI0041459

Description

Loxodonta africana laf-mir-17-1 precursor miRNA

Sequence

acugaagauugugaccagucagaauaauguCAAAGUGCUUACAGUGCAGGUAGugauuugugcaucuACUGCAGUGAAGGCACUUGUAGcauuauggugacagcugccucgggaagccaa
.((((((.((((.((((.......((((((..((((((((.((.(((((.(((((.......)).)))))))).)).))))))))...)))))))))).))))))...))))........

Structure

-------a    ---  a    g    gucagaa      -CA        A  G     G   -  au 
        cuga   ag uugu acca       uaaugu   AAGUGCUU CA UGCAG UAG ug  u
        ||||   || |||| ||||       ||||||   |||||||| || ||||| ||| ||  u
        ggcu   uc gaca uggu       auuacG   UUCACGGA GU ACGUC Auc ac  g
aaccgaag    ccg  -    g    -------      AUG        A  G     -   u  gu 

Annotation confidence Not enough data

Genome context

GL010038.1: 14397164-14397223 []

Clustered miRNAs

15 other miRNAs are < 10 kb from laf-mir-17-1

Mature laf-miR-17-1-5p

• Accession: MIMAT0062363
• Description: Loxodonta africana laf-miR-17-1-5p mature miRNA
• Sequence: 31 - CAAAGUGCUUACAGUGCAGGUAG - 53
• Evidence: not_experimental

Mature laf-miR-17-1-3p

• Accession: MIMAT0062364
• Description: Loxodonta africana laf-miR-17-1-3p mature miRNA
• Sequence: 68 - ACUGCAGUGAAGGCACUUGUAG - 89
• Evidence: not_experimental

References