Stem-loop laf-mir-9-1

Accession

MI0041478

Description

Loxodonta africana laf-mir-9-1 precursor miRNA

Sequence

cgcggcgguggcgaaggaggcucguuucucUCUUUGGUUAUCUAGCUGUAUGAgugccacagagccgucAUAAAGCUAGAUAACCGAAAGUagaaaugacucucacaacuucugcaugcgag
((((((((.((.....((((.((((((((((.(((((((((((((((.(((((..((......))..))))).))))))))))))))))).)))))))).))))....)).)))).))))..

Structure

--    -    u  cgaag    c        -  C               G     gu  ca 
  cgcg gcgg gg     gagg ucguuucu cU UUUGGUUAUCUAGCU UAUGA  gc  c
  |||| |||| ||     |||| |||||||| || ||||||||||||||| |||||  ||   
  gcgu cguc uc     cucu aguaaaga GA AAGCCAAUAGAUCGA AUAcu  cg  a
ga    a    u  -aaca    c        U  -               A     gc  ag 

Annotation confidence Not enough data

Genome context

GL010055.1: 17592787-17592848 []

Clustered miRNAs

2 other miRNAs are < 10 kb from laf-mir-9-1

Mature laf-miR-9-5p

• Accession: MIMAT0062396
• Description: Loxodonta africana laf-miR-9-5p mature miRNA
• Sequence: 31 - UCUUUGGUUAUCUAGCUGUAUGA - 53
• Evidence: not_experimental

Mature laf-miR-9-1-3p

• Accession: MIMAT0062398
• Description: Loxodonta africana laf-miR-9-1-3p mature miRNA
• Sequence: 70 - AUAAAGCUAGAUAACCGAAAGU - 91
• Evidence: not_experimental

References