Accession
MI0041481
Description
Loxodonta africana
laf-mir-200c precursor miRNA
Sequence
ucgggccgaggcgcucugggccucugugggCAUCUUACCGGACAGUGCUGGAuuucucagcuagacucUAACACUGUCUGGUAACGAUGUUcaaaggugacccaacugcucgccaggacac
...(((.(((..(...(((((.(((.(((((((((((((((((((((.((((..(((.....))).)))).))))))))))))).)))))))).))).).)))).)..)))))).......
...(((.(((..(...(((((.(((.(((((((((((((((((((((.((((..(((.....))).)))).))))))))))))).)))))))).))).).)))).)..)))))).......
Structure
----ucg c gc cuc - c g - C uu c
ggc gag g uggg c ucu ugggCAUC UUACCGGACAGUG UGGA ucu a
||| ||| | |||| | ||| |||||||| ||||||||||||| |||| ||| g
ccg cuc c accc g gga acUUGUAG AAUGGUCUGUCAC AUcu aga c
cacagga - gu --a a u a C A -c u
Annotation confidence
Not enough data
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Genome context
GL010053.1: 22279035-22279093 []
Clustered miRNAs
4 other miRNAs are < 10 kb from laf-mir-200c
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature laf-miR-200c-5p
| Accession | MIMAT0062404 |
| Description | Loxodonta africana laf-miR-200c-5p mature miRNA |
| Sequence | 31 - CAUCUUACCGGACAGUGCUGGA - 52 |
| Evidence | not_experimental |
Mature laf-miR-200c-3p
| Accession | MIMAT0062403 |
| Description | Loxodonta africana laf-miR-200c-3p mature miRNA |
| Sequence | 69 - UAACACUGUCUGGUAACGAUGUU - 91 |
| Evidence | not_experimental |
References
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