miRBase entry: ple-mir-12471

Stem-loop ple-mir-12471


Accession
MI0041503
Description
Pomphorhynchus laevis ple-mir-12471 precursor miRNA


Sequence


auugauauuauuguauaaccaaaaggauugaUGUUCUUCACCGACACGAAAUCaaagauauuuaaaacguuucguuaaaauguuuagaaauaaauaacauacaauuuaaaaaguuuaaauaaacgaaucgucuuaaguaucuuugaUUUCGUGCCGGUGAAGAACACAaaucccuuugguuauacaauaauauauaua
....(((((((((((((((((((.(((((..((((((((((((.(((((((((((((((((((((.(((.((((((....((((((((..(((((........))))).....)))))))))))))).))).))))))))))))))))))))).))))))))))))..))))).))))))))))))))))))).....

Structure
-auug                   a     ga            A                     a   u      aaaa        ---aa     aac 
     auauuauuguauaaccaaa ggauu  UGUUCUUCACCG CACGAAAUCaaagauauuuaa acg uucguu    uguuuaga     uaaau   a
     ||||||||||||||||||| |||||  |||||||||||| ||||||||||||||||||||| ||| ||||||    ||||||||     |||||    
     uauaauaacauauugguuu ccuaa  ACAAGAAGUGGC GUGCUUUaguuucuaugaauu ugc aagcaa    auaaauuu     auuua   u
auaua                   c     AC            C                     c   u      ----        gaaaa     aca 


Annotation confidence Not enough data
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Genome context
WNNJ02000321.1: 75404-75541 []

Database links

Mature ple-miR-12471-5p

Accession MIMAT0062446
Description Pomphorhynchus laevis ple-miR-12471-5p mature miRNA
Sequence 32 - UGUUCUUCACCGACACGAAAUC - 53
Evidence not_experimental

Mature ple-miR-12471-3p

Accession MIMAT0062445
Description Pomphorhynchus laevis ple-miR-12471-3p mature miRNA
Sequence 147 - UUUCGUGCCGGUGAAGAACACA - 168
Evidence not_experimental

References