miRBase entry: mms-mir-2001

Stem-loop mms-mir-2001


Accession
MI0041517
Description
Mopalia muscosa mms-mir-2001 precursor miRNA


Sequence


aacaauaaaaugaaaagaguuucguugcucUUGUGACCGUUAUAAUGGGCAUUuauagaggaaacaaUGUCCUUUAAAACGUUCACAAUGguaaagaaacaaauaaaacccgauacacau
..................(((((.(((((.((((((.((((.(((.(((((((............))))))).))).)))).)))))).))))).)))))....................

Structure
--aacaauaaaaugaaaaga     g     c      C    A   U       uauag 
                    guuuc uugcu UUGUGA CGUU UAA GGGCAUU     a
                    ||||| ||||| |||||| |||| ||| |||||||      
                    caaag aaugG AACACU GCAA AUU CCUGUaa     g
uacacauagcccaaaauaaa     a     U      U    A   U       caaag 


Annotation confidence Not enough data
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Genome context
JARFOD010132739.1: 22313-22372 [+]
Clustered miRNAs
2 other miRNAs are < 10 kb from mms-mir-2001
Name Accession Chromosome Start End Strand Confidence




Database links

Mature mms-miR-2001-5p

Accession MIMAT0062473
Description Mopalia muscosa mms-miR-2001-5p mature miRNA
Sequence 31 - UUGUGACCGUUAUAAUGGGCAUU - 53
Evidence not_experimental

Mature mms-miR-2001-3p

Accession MIMAT0062474
Description Mopalia muscosa mms-miR-2001-3p mature miRNA
Sequence 68 - UGUCCUUUAAAACGUUCACAAUG - 90
Evidence not_experimental

References