miRBase entry: mms-mir-1175

Stem-loop mms-mir-1175


Accession
MI0041525
Description
Mopalia muscosa mms-mir-1175 precursor miRNA


Sequence


guuucugcaucuaacauuggucacucugacAGUGGAGAGAGUUUUAUCUCAUCuuucuaucaucugggUGAGAUUCAACUCCUCCAACUGCuggugugaccagaaaucugcaugcuucccg
......(((((.....((((((((.(((.((((((((.(((((..(((((((((...........)))))))))..))))))))).)))).))).))))))))......).))))......

Structure
guuucu    - -uaaca        u   a    -    A     UU         uucu 
      gcau c      uuggucac cug cAGU GGAG GAGUU  AUCUCAUCu    a
      |||| |      |||||||| ||| |||| |||| |||||  |||||||||    u
      cgua g      gaccagug ggu GUCA CCUC CUCAA  UAGAGUggg    c
gcccuu    c ucuaaa        u   C    A    -     CU         ucua 


Annotation confidence Not enough data
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Genome context
JARFOD010000026.1: 22080-22140 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from mms-mir-1175
Name Accession Chromosome Start End Strand Confidence




Database links

Mature mms-miR-1175-5p

Accession MIMAT0062490
Description Mopalia muscosa mms-miR-1175-5p mature miRNA
Sequence 31 - AGUGGAGAGAGUUUUAUCUCAUC - 53
Evidence not_experimental

Mature mms-miR-1175-3p

Accession MIMAT0062489
Description Mopalia muscosa mms-miR-1175-3p mature miRNA
Sequence 69 - UGAGAUUCAACUCCUCCAACUGC - 91
Evidence not_experimental

References