miRBase entry: mms-mir-2d-2

Stem-loop mms-mir-2d-2


Accession
MI0041578
Description
Mopalia muscosa mms-mir-2d-2 precursor miRNA


Sequence


uaugaaaacaguuauuaggcuuuucacuucUGACUAAGCGACUGUGACAUGugaauucauuucgUAUCACAGCCUGCUUGGAUCAGAauugaggacuccugaauucgucugaaacac
........(((...(((((.((((((.(((((((((((((.((((((.(((.((.....)).))).))))))..))))))).)))))).))))))..)))))......)))......

Structure
uaugaaaa   ---uua     -c      c      -       -A      C   u  a 
        cag      uuagg  uuuuca uucUGA CUAAGCG  CUGUGA AUG ga u
        |||      |||||  |||||| |||||| |||||||  |||||| ||| || u
        guc      agucc  aggagu aAGACU GGUUCGU  GACACU Ugc uu c
--cacaaa   ugcuua     uc      u      A       CC      A   u  a 


Annotation confidence Not enough data
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Genome context
JARFOD010000037.1: 49292-49353 [+]
Clustered miRNAs
10 other miRNAs are < 10 kb from mms-mir-2d-2
Name Accession Chromosome Start End Strand Confidence




Database links

Mature mms-miR-2d-2-5p

Accession MIMAT0062595
Description Mopalia muscosa mms-miR-2d-2-5p mature miRNA
Sequence 31 - UGACUAAGCGACUGUGACAUG - 51
Evidence not_experimental

Mature mms-miR-2d-2-3p

Accession MIMAT0062594
Description Mopalia muscosa mms-miR-2d-2-3p mature miRNA
Sequence 65 - UAUCACAGCCUGCUUGGAUCAGA - 87
Evidence not_experimental

References