Accession
MI0041701
Description
Pongo abelii
pae-mir-542 precursor miRNA
Sequence
ucggucaaggaugcacagaucucagacaucUCGGGGAUCAUCAUGUCACGAGauaccagugugcacuUGUGACAGAUUGAUAACUGAAAggucugggagccacucaucuucguagcaaa
..(.((.((((((......((((((((...((((..((((...(((((((((.(((....)))..)))))))))...))))..))))...))))))))......)))))).).).)...
..(.((.((((((......((((((((...((((..((((...(((((((((.(((....)))..)))))))))...))))..))))...))))))))......)))))).).).)...
Structure
-uc g - a cacaga auc GG UCA -a c g u c aggaug ucucagac UCGG AUCA UGUCACGAG uac a | | | |||||| |||||||| |||| |||| ||||||||| ||| c a g uucuac agggucug AGUC UAGU ACAGUGUuc gug g aaa g u c ucaccg gAA AA UAG ac u
Annotation confidence
Not enough data
Do you think this miRNA is real?
Genome context
CM054702.2: 140562939-140562997 []
Clustered miRNAs
5 other miRNAs are < 10 kb from pae-mir-542
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature pae-miR-542-5p
| Accession | MIMAT0062841 |
| Description | Pongo abelii pae-miR-542-5p mature miRNA |
| Sequence | 31 - UCGGGGAUCAUCAUGUCACGAG - 52 |
| Evidence | not_experimental |
Mature pae-miR-542-3p
| Accession | MIMAT0062840 |
| Description | Pongo abelii pae-miR-542-3p mature miRNA |
| Sequence | 68 - UGUGACAGAUUGAUAACUGAAA - 89 |
| Evidence | not_experimental |
References
|
|
