miRBase entry: pae-mir-506

Stem-loop pae-mir-506


Accession
MI0041713
Description
Pongo abelii pae-mir-506 precursor miRNA


Sequence


ccaccaucagcuacgcuauguguagugccuUAUUCAGGAAGGUGUUACUUAAUAGauuaauauuuGUAAGGCACCCUUCUGAGUAGAguaaugugcaacauggacaacauuuguggu
..(((((........(((((((((.(((.((((((((((.(((((..((((.(((((....)))))))))))))).)))))))))).)))...))).)))))).........)))))

Structure
cc     -cagcuacg      -   --g   c          A     UA    A     u 
  accau         cuaugu gua   ugc uUAUUCAGGA GGUGU  CUUA UAGau a
  |||||         |||||| |||   ||| |||||||||| |||||  |||| |||||  
  uggug         gguaca cgu   aug GAUGAGUCUU CCACG  GAAU Guuua a
--     uuuacaaca      a   gua   A          C     --    -     u 


Annotation confidence Not enough data
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Genome context
CM054702.2: 153496308-153496364 []
Clustered miRNAs
3 other miRNAs are < 10 kb from pae-mir-506
Name Accession Chromosome Start End Strand Confidence




Database links

Mature pae-miR-506-5p

Accession MIMAT0062864
Description Pongo abelii pae-miR-506-5p mature miRNA
Sequence 31 - UAUUCAGGAAGGUGUUACUUAAUAG - 55
Evidence not_experimental

Mature pae-miR-506-3p

Accession MIMAT0062863
Description Pongo abelii pae-miR-506-3p mature miRNA
Sequence 66 - GUAAGGCACCCUUCUGAGUAGA - 87
Evidence not_experimental

References