miRBase entry: pae-mir-509-5

Stem-loop pae-mir-509-5


Accession
MI0041723
Description
Pongo abelii pae-mir-509-5 precursor miRNA


Sequence


ccauccucagacaugcugugugugguacccUACUGCAGGCAGUGGCAAUCAUGuauaauuaaaaaUGAUUGGUACGUCUGCAGGUAGAguacugcaugacacaugcaacauacaugau
...........((((.((((((((((((.(((((((((((.(((.(((((((............))))))).)))))))))).)))).))))))))).))))))).............

Structure
--ccauccucaga    c   -         c    -       A   G       Guaua 
             caug ugu gugugguac cUAC UGCAGGC GUG CAAUCAU     a
             |||| ||| ||||||||| |||| ||||||| ||| |||||||      
             guac aca uacgucaug GAUG ACGUCUG CAU GUUAGUa     u
uaguacauacaac    -   g         A    G       -   G       aaaau 


Annotation confidence Not enough data
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Genome context
CM054702.2: 153537745-153537802 []
Clustered miRNAs
2 other miRNAs are < 10 kb from pae-mir-509-5
Name Accession Chromosome Start End Strand Confidence




Database links

Mature pae-miR-509-5-5p

Accession MIMAT0062878
Description Pongo abelii pae-miR-509-5-5p mature miRNA
Sequence 31 - UACUGCAGGCAGUGGCAAUCAUG - 53
Evidence not_experimental

Mature pae-miR-509-5-3p

Accession MIMAT0062877
Description Pongo abelii pae-miR-509-5-3p mature miRNA
Sequence 66 - UGAUUGGUACGUCUGCAGGUAGA - 88
Evidence not_experimental

References