miRBase entry: pae-mir-489

Stem-loop pae-mir-489


Accession
MI0041732
Description
Pongo abelii pae-mir-489 precursor miRNA


Sequence


gcugacuacugcuguugguggcagcuugguGGUCGUAUGUGUGGCGCCAUUUacuugaaccuuuaggaGUGACAUCACAUAUACGGCAGCuaaacugcuacaugggacaacaauuaagag
((........))((((((((((((.(((((.(((((((((((((.(.((((..(((((....))))))))).).))))))))))))).))))).)))))))......)))))........

Structure
gcugacuacugc     ------       c     G             C C    Ua     a 
            uguug      guggcag uuggu GUCGUAUGUGUGG G CAUU  cuuga c
            |||||      ||||||| ||||| ||||||||||||| | ||||  |||||  
            acaac      caucguc aauCG CGGCAUAUACACU C GUGa  ggauu c
----gagaauua     agggua       a     A             A A    --     u 


Annotation confidence Not enough data
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Genome context
CM054685.2: 82851746-82851805 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from pae-mir-489
Name Accession Chromosome Start End Strand Confidence




Database links

Mature pae-miR-489-5p

Accession MIMAT0062896
Description Pongo abelii pae-miR-489-5p mature miRNA
Sequence 31 - GGUCGUAUGUGUGGCGCCAUUU - 52
Evidence not_experimental

Mature pae-miR-489-3p

Accession MIMAT0062895
Description Pongo abelii pae-miR-489-3p mature miRNA
Sequence 69 - GUGACAUCACAUAUACGGCAGC - 90
Evidence not_experimental

References