Stem-loop pae-mir-520h-1

Accession

MI0041756

Description

Pongo abelii pae-mir-520h-1 precursor miRNA

Sequence

cuggagcaagaagaucccacgcugugacccUCUAGAGGAAGCACUUUCUGUUuguuguccgagagaaaaCAAAGUGCUUCCCUUUAGAGUguuacguuugggaaaagccgcguugaaguu
.....((.......(((((.((.(((((.(((((((((((((((((..(((((.............))))))))))))).))))))))).))))))).)))))......)).........

Structure

----cugga  aagaaga     c  u     c         -        UC     guugu 
         gc       uccca gc gugac cUCUAGAGG AAGCACUU  UGUUu     c
         ||       ||||| || ||||| ||||||||| ||||||||  |||||     c
         cg       agggu ug cauug GAGAUUUCC UUCGUGAA  ACaaa     g
uugaaguug  -ccgaaa     u  -     U         C        --     agaga 

Annotation confidence Not enough data

Genome context

CM054699.2: 60117180-60117239 [+]

Clustered miRNAs

5 other miRNAs are < 10 kb from pae-mir-520h-1

Mature pae-miR-520h-1-5p

• Accession: MIMAT0062942
• Description: Pongo abelii pae-miR-520h-1-5p mature miRNA
• Sequence: 31 - UCUAGAGGAAGCACUUUCUGUU - 52
• Evidence: not_experimental

Mature pae-miR-520h-3p

• Accession: MIMAT0062941
• Description: Pongo abelii pae-miR-520h-3p mature miRNA
• Sequence: 70 - CAAAGUGCUUCCCUUUAGAGU - 90
• Evidence: not_experimental

References