miRBase entry: pae-mir-517c-3

Stem-loop pae-mir-517c-3


Accession
MI0041762
Description
Pongo abelii pae-mir-517c-3 precursor miRNA


Sequence


uacuggagcaagaagaucucaggcagugacCCUCUAGAAGGAAGCACUGUCUguugucuaagaaaagAUCGUGCAUCCUUUUAGAGUGUuacuguuugagaaaagcaacguugaagaug
..((..(((.......((((((((((((((.(((((((((((.((((.((((.............)))).)))).))))))))))).))))))))))))))........)))..))...

Structure
-ua  gg   -aagaaga              C           A    U    guugu 
   cu  agc        ucucaggcagugac CUCUAGAAGGA GCAC GUCU     c
   ||  |||        |||||||||||||| ||||||||||| |||| ||||     u
   ga  uug        agaguuugucauUG GAGAUUUUCCU CGUG UAga     a
gua  ag   caacgaaa              U           A    C    aaaga 


Annotation confidence Not enough data
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Genome context
CM054699.2: 60115975-60116033 [+]
Clustered miRNAs
5 other miRNAs are < 10 kb from pae-mir-517c-3
Name Accession Chromosome Start End Strand Confidence




Database links

Mature pae-miR-517c-3-5p

Accession MIMAT0062951
Description Pongo abelii pae-miR-517c-3-5p mature miRNA
Sequence 31 - CCUCUAGAAGGAAGCACUGUCU - 52
Evidence not_experimental

Mature pae-miR-517c-3p

Accession MIMAT0062950
Description Pongo abelii pae-miR-517c-3p mature miRNA
Sequence 68 - AUCGUGCAUCCUUUUAGAGUGU - 89
Evidence not_experimental

References