Stem-loop pae-mir-518c

Accession

MI0041766

Description

Pongo abelii pae-mir-518c precursor miRNA

Sequence

gcuggagcgagaagaucucaugcugugacuCUCUGGAGGGAAGCACUUUCUGUUgucugaaagaaaaCAAAGCGCUUCUCUUUAGAGUGuuacgguuugagaaaagcaacguugaaguu
(((..((((......(((((.((((((((.((((((((((((((.(((..((((.(((...))).))))))).)))))))))))))).)))))))).))))).......))))..))).

Structure

-   gg    -agaaga     u        u              A   UC    g   g 
 gcu  agcg       ucuca gcugugac CUCUGGAGGGAAGC CUU  UGUU ucu  
 |||  ||||       ||||| |||||||| |||||||||||||| |||  |||| ||| a
 uga  uugc       agagu uggcauuG GAGAUUUCUCUUCG GAA  ACaa aga  
u   ag    aacgaaa     u        U              C   --    a   a 

Annotation confidence Not enough data

Genome context

CM054699.2: 60086239-60086297 [+]

Clustered miRNAs

8 other miRNAs are < 10 kb from pae-mir-518c

Mature pae-miR-518c-5p

• Accession: MIMAT0062957
• Description: Pongo abelii pae-miR-518c-5p mature miRNA
• Sequence: 31 - CUCUGGAGGGAAGCACUUUCUGUU - 54
• Evidence: not_experimental

Mature pae-miR-518c-3p

• Accession: MIMAT0062956
• Description: Pongo abelii pae-miR-518c-3p mature miRNA
• Sequence: 68 - CAAAGCGCUUCUCUUUAGAGUG - 89
• Evidence: not_experimental

References