miRBase entry: pae-mir-523

Stem-loop pae-mir-523


Accession
MI0041770
Description
Pongo abelii pae-mir-523 precursor miRNA


Sequence


ggugcuggagcaagaucucgugcugugaccCUCUAGAGGGAAGCACUUUCUGucgucugaaagaaaaGAACGCGCUUCCCUAUGGAGGGuuacccuuugagaaaagcagcauugaaguu
(((((((........(((((....(((((((((((.((((((((.(.((((.((........))..)))).).)))))))).)))))))))))....)))))....)))))))......

Structure
------       gagcaaga     ugcu           G        A U    -G  guc 
      ggugcug        ucucg    gugaccCUCUA AGGGAAGC C UUCU  uc   u
      |||||||        |||||    ||||||||||| |||||||| | ||||  ||    
      uuacgac        agagu    cauuGGGAGGU UCCCUUCG G AAGa  ag   g
uugaag       ----gaaa     uucc           A        C C    aa  aaa 


Annotation confidence Not enough data
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Genome context
CM054699.2: 60075801-60075859 [+]
Clustered miRNAs
8 other miRNAs are < 10 kb from pae-mir-523
Name Accession Chromosome Start End Strand Confidence




Database links

Mature pae-miR-523-5p

Accession MIMAT0062964
Description Pongo abelii pae-miR-523-5p mature miRNA
Sequence 31 - CUCUAGAGGGAAGCACUUUCUG - 52
Evidence not_experimental

Mature pae-miR-523-3p

Accession MIMAT0062965
Description Pongo abelii pae-miR-523-3p mature miRNA
Sequence 68 - GAACGCGCUUCCCUAUGGAGGG - 89
Evidence not_experimental

References