miRBase entry: pae-mir-515-1

Stem-loop pae-mir-515-1


Accession
MI0041779
Description
Pongo abelii pae-mir-515-1 precursor miRNA


Sequence


guuuuggagugagaagaucucaugcagucaUUCUCCAAAAGAAAGCACUUUCUGuugucugaaagcaGAGUGCCUUCUUUUGGAGCGUUacuguuugagaaaaaccacguugaaguuga
.((((((.(((.(....(((((.(((((.((.(((((((((((.((((..((((((.......)))))))))).))))))))))).)).))))).)))))....)))).))))))....

Structure
---g      a   a aaga     u     c  U           A    UU      gu 
    uuuugg gug g    ucuca gcagu aU CUCCAAAAGAA GCAC  UCUGuu  c
    |||||| ||| |    ||||| ||||| || ||||||||||| ||||  ||||||  u
    gaaguu cac c    agagu uguca UG GAGGUUUUCUU CGUG  AGacga  g
aguu      g   - aaaa     u     U  C           C    --      aa 


Annotation confidence Not enough data
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Genome context
CM054699.2: 60056117-60056175 [+]
Clustered miRNAs
8 other miRNAs are < 10 kb from pae-mir-515-1
Name Accession Chromosome Start End Strand Confidence




Database links

Mature pae-miR-515-5p

Accession MIMAT0062980
Description Pongo abelii pae-miR-515-5p mature miRNA
Sequence 31 - UUCUCCAAAAGAAAGCACUUUCUG - 54
Evidence not_experimental

Mature pae-miR-515-3p

Accession MIMAT0062981
Description Pongo abelii pae-miR-515-3p mature miRNA
Sequence 68 - GAGUGCCUUCUUUUGGAGCGUU - 89
Evidence not_experimental

References