Stem-loop pae-mir-338-2

Accession

MI0041817

Description

Pongo abelii pae-mir-338-2 precursor miRNA

Sequence

ggcaggucgggaggcuggcagcugcccucuUCAACAAAAUCACUGAUGCUGGAguugccugagucaucacuCAGCACCAGGAUAUUGUUGGAGaggacggccgugcggcgucuggggcugaca
..(((.((.(((.((((((.((((.((((((((((((.(((.(((.(((((.(((.....((....)))))))))).)))))).)))))))))))).)))).)).)))).))).)).)))...

Structure

-gg   g  g   g    -  a    c            A   A   A     G   ugccu  g 
   cag uc gga gcug gc gcug ccucuUCAACAA AUC CUG UGCUG Agu     ga u
   ||| || ||| |||| || |||| |||||||||||| ||| ||| ||||| |||     ||  
   guc gg ucu cggc ug cggc ggaGAGGUUGUU UAG GAC ACGAC uca     cu c
aca   g  g   g    g  c    a            A   -   C     -   -----  a 

Annotation confidence Not enough data

Genome context

CM054698.2: 96593343-96593405 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from pae-mir-338-2

Mature pae-miR-338-2-5p

• Accession: MIMAT0063055
• Description: Pongo abelii pae-miR-338-2-5p mature miRNA
• Sequence: 31 - UCAACAAAAUCACUGAUGCUGGA - 53
• Evidence: not_experimental

Mature pae-miR-338-2-3p

• Accession: MIMAT0063056
• Description: Pongo abelii pae-miR-338-2-3p mature miRNA
• Sequence: 72 - CAGCACCAGGAUAUUGUUGGAG - 93
• Evidence: not_experimental

References