miRBase entry: pae-mir-181a-1

Stem-loop pae-mir-181a-1


Accession
MI0041883
Description
Pongo abelii pae-mir-181a-1 precursor miRNA


Sequence


agaauucugaguuuugagguugcuucagugAACAUUCAACGCUGUCGGUGAGUuuggaauuaaaaucaaaaCCAUCGACCGUUGAUUGUACCcuauggcuaaccaucaucuacuccauggug
........((((..((((((((((..((.(.(((.((((((..(((((((.((((.((.......)).))))))))))))))))).))).).))..))).)))).)))...)))).......

Structure
agaauucu    -uu   -    -   uc  u A   U      CU       A    g  au 
        gagu   uga gguu gcu  ag g ACA UCAACG  GUCGGUG GUuu ga  u
        ||||   ||| |||| |||  || | ||| ||||||  ||||||| |||| ||  a
        cuca   acu ccaa cgg  uc C UGU AGUUGC  CAGCUAC Caaa cu  a
-gugguac    ucu   a    u   ua  C A   U      --       -    a  aa 


Annotation confidence Not enough data
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Genome context
CM054679.2: 50742117-50742178 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from pae-mir-181a-1
Name Accession Chromosome Start End Strand Confidence




Database links

Mature pae-miR-181a-5p

Accession MIMAT0063179
Description Pongo abelii pae-miR-181a-5p mature miRNA
Sequence 31 - AACAUUCAACGCUGUCGGUGAGU - 53
Evidence not_experimental

Mature pae-miR-181a-1-3p

Accession MIMAT0063181
Description Pongo abelii pae-miR-181a-1-3p mature miRNA
Sequence 72 - CCAUCGACCGUUGAUUGUACC - 92
Evidence not_experimental

References