Stem-loop pae-mir-412

Accession

MI0041888

Description

Pongo abelii pae-mir-412 precursor miRNA

Sequence

aucagcaccauucugggguacggggauggaUGGUCGACCAGUUGGAAAGUAAUuguuucuaaugUACUUCACCUGGUCCACUAGCcguccguauccgcugcagccuguggggccu
....((.((((.(((((((((..((((((.((((.((((((.(((..((((((((....)))).))))))).)))))).)))).))))))))))))....)))...)))).))..

Structure

auca  a    --u   ----      gg      a    C      U   AA    -    u 
    gc ccau   cug    ggguac  ggaugg UGGU GACCAG UGG  AGUA AUug u
    || ||||   |||    ||||||  |||||| |||| |||||| |||  |||| ||||  
    cg ggug   gac    ccuaug  ccugcC AUCA CUGGUC ACU  UCAU uaau u
--uc  g    ucc   gucg      --      G    C      C   --    g    c 

Annotation confidence Not enough data

Genome context

CM054694.2: 105497485-105497539 [+]

Clustered miRNAs

9 other miRNAs are < 10 kb from pae-mir-412

Mature pae-miR-412-5p

• Accession: MIMAT0063190
• Description: Pongo abelii pae-miR-412-5p mature miRNA
• Sequence: 31 - UGGUCGACCAGUUGGAAAGUAAU - 53
• Evidence: not_experimental

Mature pae-miR-412-3p

• Accession: MIMAT0063191
• Description: Pongo abelii pae-miR-412-3p mature miRNA
• Sequence: 65 - UACUUCACCUGGUCCACUAGC - 85
• Evidence: not_experimental

References