miRBase entry: pae-mir-487a

Stem-loop pae-mir-487a


Accession
MI0041895
Description
Pongo abelii pae-mir-487a precursor miRNA


Sequence


ccgucaccgucagccuucgguacuugaagaGUGGUUAUCCCUGCUGUGUUCGcuuaauuugugacgAAUCAUACAGGGACAUCCAGUUuuucaguaucaaauacugcuuuggaaggcu
...........(((((((((((((.(((((.(((...((((((.(((((((((.........).)))).))))))))))...))).))))).)))))).............)))))))

Structure
ccgucaccguc       -------------      u     G   UUA      C    -    - uua 
           agccuuc             gguacu gaaga UGG   UCCCUG UGUG UUCG c   a
           |||||||             |||||| ||||| |||   |||||| |||| |||| |   u
           ucggaag             cuauga uuuUU ACC   AGGGAC AUAC AAgc g   u
-----------       guuucgucauaaa      c     G   UAC      -    U    a ugu 


Annotation confidence Not enough data
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Genome context
CM054694.2: 105484476-105484533 [+]
Clustered miRNAs
15 other miRNAs are < 10 kb from pae-mir-487a
Name Accession Chromosome Start End Strand Confidence




Database links

Mature pae-miR-487a-5p

Accession MIMAT0063205
Description Pongo abelii pae-miR-487a-5p mature miRNA
Sequence 31 - GUGGUUAUCCCUGCUGUGUUCG - 52
Evidence not_experimental

Mature pae-miR-487a-3p

Accession MIMAT0063204
Description Pongo abelii pae-miR-487a-3p mature miRNA
Sequence 67 - AAUCAUACAGGGACAUCCAGUU - 88
Evidence not_experimental

References