Accession
MI0041898
Description
Pongo abelii
pae-mir-539 precursor miRNA
Sequence
uuccuguccgugcugcuguuucauacuugaGGAGAAAUUAUCCUUGGUGUGUUCgcuuuauuuaugaugaAUCAUACAAGGACAAUUUCUUUUUgaguaucaaaucuugccucggcagacuucc
...(((.(((.((....((((.(((((((((((((((((.((((((.(((((((((.........).)))).)))))))))).))))))))))))))))).))))...))..))))))......
...(((.(((.((....((((.(((((((((((((((((.((((((.(((((((((.........).)))).)))))))))).))))))))))))))))).))))...))..))))))......
Structure
---uuc u -u ugcu c A G - - uuu
cug ccg gc guuu auacuugaGGAGAAAUU UCCUUG UGUG UUCg c a
||| ||| || |||| ||||||||||||||||| |||||| |||| |||| | u
gac ggc cg uaaa uaugagUUUUUCUUUAA AGGAAC AUAC Aagu g u
ccuuca - uc -uuc c C - U a uau
Annotation confidence
Not enough data
Do you think this miRNA is real?
Genome context
CM054694.2: 105479320-105479383 [+]
Clustered miRNAs
18 other miRNAs are < 10 kb from pae-mir-539
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature pae-miR-539-5p
| Accession | MIMAT0063211 |
| Description | Pongo abelii pae-miR-539-5p mature miRNA |
| Sequence | 31 - GGAGAAAUUAUCCUUGGUGUGUUC - 54 |
| Evidence | not_experimental |
Mature pae-miR-539-3p
| Accession | MIMAT0063210 |
| Description | Pongo abelii pae-miR-539-3p mature miRNA |
| Sequence | 71 - AUCAUACAAGGACAAUUUCUUUUU - 94 |
| Evidence | not_experimental |
References
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