Stem-loop pae-mir-654

Accession

MI0041903

Description

Pongo abelii pae-mir-654 precursor miRNA

Sequence

gggcugagcccuccaggguaaguggaaagAUGGUGGGCCGCAGAACAUGUGcugaguucgugccaUAUGUCUGCUGACCAUCACCUuuagaagcccccuuucgcugaggagccagc
..((((.((((((.((.(.(((.((((((.((((((.(.(((((.(((((((.........).))))))))))).).)))))).))))......)).))).).)))))).))))))

Structure

gg    a  -    c  g u   u  ------    A      G C     A      - uga 
  gcug gc ccuc ag g aag gg      aaag UGGUGG C GCAGA CAUGUG c   g
  |||| || |||| || | ||| ||      |||| |||||| | ||||| |||||| |   u
  cgac cg ggag uc c uuc cc      uuUC ACUACC G CGUCU GUAUac g   u
--    -  a    -  g u   c  cgaaga    C      A U     -      c ugc 

Annotation confidence Not enough data

Genome context

CM054694.2: 105472227-105472282 [+]

Clustered miRNAs

15 other miRNAs are < 10 kb from pae-mir-654

Mature pae-miR-654-5p

• Accession: MIMAT0063219
• Description: Pongo abelii pae-miR-654-5p mature miRNA
• Sequence: 30 - AUGGUGGGCCGCAGAACAUGUG - 51
• Evidence: not_experimental

Mature pae-miR-654-3p

• Accession: MIMAT0063218
• Description: Pongo abelii pae-miR-654-3p mature miRNA
• Sequence: 66 - UAUGUCUGCUGACCAUCACCU - 86
• Evidence: not_experimental

References