miRBase entry: pae-mir-494

Stem-loop pae-mir-494


Accession
MI0041907
Description
Pongo abelii pae-mir-494 precursor miRNA


Sequence


aucagugcuaaucuucgauacucgaaggagAGGUUGUCCGUGUUGUCUUCUCUuuauuuaugaUGAAACAUACACGGGAAACCUCUuuuuuaguaucaaaucccacccuggaggca
.....((((.......((((((.((((((((((((.((((((((((.(((((.........)).)))))).))))))).))))))))))))))))))...(((......)))))))

Structure
aucag    --------aaucuuc      c            G       -   C   -  Uuu 
     ugcu               gauacu gaaggagAGGUU UCCGUGU UGU UUC UC   a
     ||||               |||||| |||||||||||| ||||||| ||| ||| ||   u
     acgg               cuauga uuuuuUCUCCAA GGGCACA ACA AAG ag   u
-----    aggucccacccuaaa      -            A       U   -   U  uau 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
CM054694.2: 105460648-105460703 [+]
Clustered miRNAs
11 other miRNAs are < 10 kb from pae-mir-494
Name Accession Chromosome Start End Strand Confidence




Database links

Mature pae-miR-494-5p

Accession MIMAT0063227
Description Pongo abelii pae-miR-494-5p mature miRNA
Sequence 31 - AGGUUGUCCGUGUUGUCUUCUCU - 53
Evidence not_experimental

Mature pae-miR-494-3p

Accession MIMAT0063226
Description Pongo abelii pae-miR-494-3p mature miRNA
Sequence 64 - UGAAACAUACACGGGAAACCUCU - 86
Evidence not_experimental

References