miRBase entry: pae-mir-105-1

Stem-loop pae-mir-105-1


Accession
MI0041962
Description
Pongo abelii pae-mir-105-1 precursor miRNA


Sequence


uguguugcagaaccugagugugcaucguggUCAAAUGCUCAGACUCCUGUGGUGgcugcucaugcaCCACGGAUGUUUGAGCAUGUGCUAcggugucuacuuuugcuaccuugcugucu
...((.(((((.....((((.(((((((((.((.((((((((((..((((((((..........))))))))..)))))))))).))))))))))).))))))))).))..........

Structure
-------ugu  u     accug    u         U  A          UC        gcug 
          gu gcaga     agug gcaucgugg CA AUGCUCAGAC  CUGUGGUG    c
          || |||||     |||| ||||||||| || ||||||||||  ||||||||     
          ca cguuu     ucau uguggcAUC GU UACGAGUUUG  GGCACCac    u
ucugucguuc  u     -----    c         -  G          UA        guac 


Annotation confidence Not enough data
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Genome context
CM054702.2: 158891203-158891261 []
Clustered miRNAs
1 other miRNA is < 10 kb from pae-mir-105-1
Name Accession Chromosome Start End Strand Confidence




Database links

Mature pae-miR-105-5p

Accession MIMAT0063324
Description Pongo abelii pae-miR-105-5p mature miRNA
Sequence 31 - UCAAAUGCUCAGACUCCUGUGGUG - 54
Evidence not_experimental

Mature pae-miR-105-3p

Accession MIMAT0063325
Description Pongo abelii pae-miR-105-3p mature miRNA
Sequence 67 - CCACGGAUGUUUGAGCAUGUGCUA - 90
Evidence not_experimental

References