Stem-loop pae-mir-449c

Accession

MI0041981

Description

Pongo abelii pae-mir-449c precursor miRNA

Sequence

agcaauggauaaagcugggaugugucagguAGGCAGUGUAUUGCUAGCGGCUGUUaauaaaauuuuaaCAGUUGCUAGUUGCACUCUCUGuugcauucagaagcacgccccccaaagaaau
.....(((.....(((.((((((..(((...((.((((((..(((((((((((((((.......))))))))))))))))))))))))))..))))))...))).......))).......

Structure

--agcaa   --auaaa   --g      gu   guA  C      UU               ua 
       ugg       gcu   ggaugu  cag   GG AGUGUA  GCUAGCGGCUGUUaa  a
       |||       |||   ||||||  |||   || ||||||  |||||||||||||||  a
       acc       cga   cuuacg  GUC   UC UCACGU  UGAUCGUUGACaauu  a
uaaagaa   ccccgca   aga      uu   ---  -      --               uu 

Annotation confidence Not enough data

Genome context

CM054683.2: 64274461-64274521 []

Clustered miRNAs

2 other miRNAs are < 10 kb from pae-mir-449c

Mature pae-miR-449c-5p

• Accession: MIMAT0063357
• Description: Pongo abelii pae-miR-449c-5p mature miRNA
• Sequence: 31 - AGGCAGUGUAUUGCUAGCGGCUGUU - 55
• Evidence: not_experimental

Mature pae-miR-449c-3p

• Accession: MIMAT0063358
• Description: Pongo abelii pae-miR-449c-3p mature miRNA
• Sequence: 69 - CAGUUGCUAGUUGCACUCUCUG - 90
• Evidence: not_experimental

References