Stem-loop pae-mir-27a

Accession

MI0041999

Description

Pongo abelii pae-mir-27a precursor miRNA

Sequence

gccccgaagccugugcguggccugaggagcAGGGCUUAGCUGCUUGUGAGCAggguccacaccaaguugugUUCACAGUGGCUAAGUUCCGCcccccaggcccucaccuccucuggccuugc
(((..((.(...(((.(.((((((.((.((.(((((((((((((.(((((((.((.(........))).)))))))))))))))))))).)).)).))))))).)))...))).))).....

Structure

-----   cc  a ccu   c u      a  a  A             U       g  u cac 
     gcc  ga g   gug g ggccug gg gc GGGCUUAGCUGCU GUGAGCA gg c   a
     |||  || |   ||| | |||||| || || ||||||||||||| ||||||| || |    
     cgg  cu c   cac c ccggac cc CG CUUGAAUCGGUGA CACUUgu uu g   c
cguuc   -u  - cuc   u -      c  c  C             -       g  - aac 

Annotation confidence Not enough data

Genome context

CM054699.2: 13876252-13876313 []

Clustered miRNAs

2 other miRNAs are < 10 kb from pae-mir-27a

Mature pae-miR-27a-5p

• Accession: MIMAT0063393
• Description: Pongo abelii pae-miR-27a-5p mature miRNA
• Sequence: 31 - AGGGCUUAGCUGCUUGUGAGCA - 52
• Evidence: not_experimental

Mature pae-miR-27a-3p

• Accession: MIMAT0063392
• Description: Pongo abelii pae-miR-27a-3p mature miRNA
• Sequence: 72 - UUCACAGUGGCUAAGUUCCGC - 92
• Evidence: not_experimental

References