miRBase entry: pae-mir-23a

Stem-loop pae-mir-23a


Accession
MI0042006
Description
Pongo abelii pae-mir-23a precursor miRNA


Sequence


gccccccucaccccugugccacggccggcuGGGGUUCCUGGGGAUGGGAUUUgcuuccugucacaaAUCACAUUGCCAGGGAUUUCCAAccgacccugagcucugccaccgaggaugcu
((...((((......(.((((.((.(((.((((((((((((.((((.((((((..........)))))).)))).))))))).))))).))).)).)).)).).......))))..)).

Structure
-  ccc    -accccu u  -  c  c   c     -       G    G      cuuc 
 gc   ccuc       g gc ca gg cgg uGGGG UUCCUGG GAUG GAUUUg    c
 ||   ||||       | || || || ||| ||||| ||||||| |||| ||||||     
 cg   ggag       c cg gu cc gcc ACCUU AGGGACC UUAC CUAaac    u
u  -ua    ccaccgu u  a  c  a   A     U       G    A      acug 


Annotation confidence Not enough data
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Genome context
CM054699.2: 13876398-13876456 []
Clustered miRNAs
2 other miRNAs are < 10 kb from pae-mir-23a
Name Accession Chromosome Start End Strand Confidence




Database links

Mature pae-miR-23a-5p

Accession MIMAT0063405
Description Pongo abelii pae-miR-23a-5p mature miRNA
Sequence 31 - GGGGUUCCUGGGGAUGGGAUUU - 52
Evidence not_experimental

Mature pae-miR-23a-3p

Accession MIMAT0063404
Description Pongo abelii pae-miR-23a-3p mature miRNA
Sequence 67 - AUCACAUUGCCAGGGAUUUCCAA - 89
Evidence not_experimental

References