miRBase entry: pae-mir-424

Stem-loop pae-mir-424


Accession
MI0042025
Description
Pongo abelii pae-mir-424 precursor miRNA


Sequence


cgauuccccuucauugacuccgaggggauaCAGCAGCAAUUCAUGUUUUGAAguguucuaaaugguuCAAAACGUGAGGCGCUGCUAUAcccccucguggggaagguagaagguggggu
..(((((((((((((..((((((((((.((.((((((..(((((((((((((.((((...)))).)))))))))))))..)))))).)).))))))).)))...))).))))).)))))

Structure
cg     -     -   -ga   -       a  C      AA             g    c 
  auucc ccuuc auu   cuc cgagggg ua AGCAGC  UUCAUGUUUUGAA uguu  
  ||||| ||||| |||   ||| ||||||| || ||||||  ||||||||||||| |||| u
  ugggg ggaag ugg   ggg gcucccc AU UCGUCG  GAGUGCAAAACuu guaa  
--     u     a   aag   u       c  A      CG             g    a 


Annotation confidence Not enough data
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Genome context
CM054702.2: 140568229-140568287 []
Clustered miRNAs
5 other miRNAs are < 10 kb from pae-mir-424
Name Accession Chromosome Start End Strand Confidence




Database links

Mature pae-miR-424-5p

Accession MIMAT0063441
Description Pongo abelii pae-miR-424-5p mature miRNA
Sequence 31 - CAGCAGCAAUUCAUGUUUUGAA - 52
Evidence not_experimental

Mature pae-miR-424-3p

Accession MIMAT0063442
Description Pongo abelii pae-miR-424-3p mature miRNA
Sequence 68 - CAAAACGUGAGGCGCUGCUAUA - 89
Evidence not_experimental

References