Stem-loop pae-mir-125a

Accession

MI0042030

Description

Pongo abelii pae-mir-125a precursor miRNA

Sequence

ccaccgcacaccauguugccagucucuaggUCCCUGAGACCCUUUAACCUGUGAggacauccagggucACAGGUGAGGUUCUUGGGAGCCuggcgucuggcccaaccacacaccugggga
((.(((........((((((((.(.((((((.(((((((.((((..((((((((((....))....)))))))))))).))))))).)))))).).)))))..)))........))))).

Structure

-  a   cacaccau   --     u u      C       C    UA        ----  a 
 cc ccg        guu  gccag c cuaggU CCUGAGA CCUU  ACCUGUGA    gg c
 || |||        |||  ||||| | |||||| ||||||| ||||  ||||||||    ||  
 gg ggu        caa  cgguc g gguCCG GGGUUCU GGAG  UGGACAcu    cc a
a  -   ccacacac   cc     u c      A       U    --        ggga  u 

Annotation confidence Not enough data

Genome context

CM054699.2: 57927510-57927569 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from pae-mir-125a

Mature pae-miR-125a-5p

• Accession: MIMAT0063450
• Description: Pongo abelii pae-miR-125a-5p mature miRNA
• Sequence: 31 - UCCCUGAGACCCUUUAACCUGUGA - 54
• Evidence: not_experimental

Mature pae-miR-125a-3p

• Accession: MIMAT0063451
• Description: Pongo abelii pae-miR-125a-3p mature miRNA
• Sequence: 69 - ACAGGUGAGGUUCUUGGGAGCC - 90
• Evidence: not_experimental

References