Accession
MI0042079
Description
Platynereis dumerilii
pdu-mir-2001 precursor miRNA
Sequence
augcauguuacuauuaagccucucuaugauUUGUGACCGUUACAAUGGGCAuguguguaacugCUCAUUGUUACGUUGACAACUuuuagaugggcacugucugcgcaugugcaa
..((((((.........((((.((((.((.((((.(.(((.((((((((((.((.....)))))))))))).))).).)))).)).)))).)))).........))))))....
..((((((.........((((.((((.((.((((.(.(((.((((((((((.((.....)))))))))))).))).).)))).)).)))).)))).........))))))....
Structure
--au uacuauuaa c u u G C U u g
gcaugu gccu ucua ga UUGU A CGU ACAAUGGGCA gu u
|||||| |||| |||| || |||| | ||| |||||||||| || g
uguacg cggg agau uU AACA U GCA UGUUACUCgu ca u
aacg cgucuguca u u C G U U - a
Annotation confidence
Not enough data
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Genome context
JAPTHN010000005.1: 66483700-66483753 []
Clustered miRNAs
2 other miRNAs are < 10 kb from pdu-mir-2001
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature pdu-miR-2001-5p
| Accession | MIMAT0063535 |
| Description | Platynereis dumerilii pdu-miR-2001-5p mature miRNA |
| Sequence | 31 - UUGUGACCGUUACAAUGGGCA - 51 |
| Evidence | not_experimental |
Mature pdu-miR-2001-3p
| Accession | MIMAT0063536 |
| Description | Platynereis dumerilii pdu-miR-2001-3p mature miRNA |
| Sequence | 64 - CUCAUUGUUACGUUGACAACU - 84 |
| Evidence | not_experimental |
References
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