Accession
MI0042080
Description
Platynereis dumerilii
pdu-mir-2000 precursor miRNA
Sequence
accaucuacuaauaaauccguguuucuugaCUAAAAGUAUUGAAGGCUUUAAgucaaaucucuguuAAAGUCUUCACUACUUUUAGUUuggaaacgcacccuuaacgucacggcgcga
...................((((((((.(((((((((((.((((((((((((............)))))))))))).))))))))))).))))))))........(((......))).
...................((((((((.(((((((((((.((((((((((((............)))))))))))).))))))))))).))))))))........(((......))).
Structure
--accaucuacuaauaaaucc u U gucaa
guguuucu gaCUAAAAGUA UGAAGGCUUUAA a
|||||||| ||||||||||| ||||||||||||
cgcaaagg UUGAUUUUCAU ACUUCUGAAAuu u
agcgcggcacugcaauuccca u C gucuc
Annotation confidence
Not enough data
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Genome context
JAPTHN010000002.1: 43826993-43827050 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from pdu-mir-2000
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature pdu-miR-2000-5p
| Accession | MIMAT0063538 |
| Description | Platynereis dumerilii pdu-miR-2000-5p mature miRNA |
| Sequence | 31 - CUAAAAGUAUUGAAGGCUUUAA - 52 |
| Evidence | not_experimental |
Mature pdu-miR-2000-3p
| Accession | MIMAT0063537 |
| Description | Platynereis dumerilii pdu-miR-2000-3p mature miRNA |
| Sequence | 67 - AAAGUCUUCACUACUUUUAGUU - 88 |
| Evidence | not_experimental |
References
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