Accession
MI0042082
Description
Platynereis dumerilii
pdu-mir-1998 precursor miRNA
Sequence
gacguaagaagugaccacuugucccaaaugAUGUAUAUCCCUACGUCCACACUucccucuccagUUGAACGCAGAGAUGUACAUCAuccauuggacgaacagccucacgugacugg
.((((..((.((......((((((...((((((((((((.((.(((.((.(((.........))))).))).)).)))))))))))).....))))))...)).))))))......
.((((..((.((......((((((...((((((((((((.((.(((.((.(((.........))))).))).)).)))))))))))).....))))))...)).))))))......
Structure
-----g aa a gaccac --caa C A C C ucc
acgu ga gu uugucc augAUGUAUAUC CU CGU CA ACU c
|||| || || |||||| |||||||||||| || ||| || ||| u
ugca cu cg agcagg uACUACAUGUAG GA GCA GU Uga c
ggucag -- c ---aca uuacc A C A - ccu
Annotation confidence
Not enough data
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Genome context
JAPTHN010000002.1: 43820343-43820398 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from pdu-mir-1998
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature pdu-miR-1998-5p
| Accession | MIMAT0063542 |
| Description | Platynereis dumerilii pdu-miR-1998-5p mature miRNA |
| Sequence | 31 - AUGUAUAUCCCUACGUCCACACU - 53 |
| Evidence | not_experimental |
Mature pdu-miR-1998-3p
| Accession | MIMAT0063541 |
| Description | Platynereis dumerilii pdu-miR-1998-3p mature miRNA |
| Sequence | 65 - UUGAACGCAGAGAUGUACAUCA - 86 |
| Evidence | not_experimental |
References
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