miRBase entry: pdu-mir-1989a-2

Stem-loop pdu-mir-1989a-2


Accession
MI0042092
Description
Platynereis dumerilii pdu-mir-1989a-2 precursor miRNA


Sequence


uacaauaagaauauugcacccgcacugauaUCAGCUGUAAAGAUGCCUUCUUgaaauuuaaacaaGGAGUCAUUUUAACUGCUGACAuuggcuaggucucacucagcgcagacauau
..............(((....)))(((((.(((((.((.((((((.(((((((.........))))))).)))))).)).))))).)))))....(((((.......).))))....

Structure
--uacaauaagaauauugcacccgca     a     U  A      C       aaa 
                          cugau UCAGC GU AAGAUG CUUCUUg   u
                          ||||| ||||| || |||||| |||||||   u
                          gguuA AGUCG CA UUUUAC GAGGaac   u
uauacagacgcgacucacucuggauc     C     U  A      U       aaa 


Annotation confidence Not enough data
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Genome context
JAPTHN010000010.1: 38602338-38602394 []
Clustered miRNAs
5 other miRNAs are < 10 kb from pdu-mir-1989a-2
Name Accession Chromosome Start End Strand Confidence




Database links

Mature pdu-miR-1989a-5p

Accession MIMAT0063559
Description Platynereis dumerilii pdu-miR-1989a-5p mature miRNA
Sequence 31 - UCAGCUGUAAAGAUGCCUUCUU - 52
Evidence not_experimental

Mature pdu-miR-1989a-2-3p

Accession MIMAT0063561
Description Platynereis dumerilii pdu-miR-1989a-2-3p mature miRNA
Sequence 66 - GGAGUCAUUUUAACUGCUGACA - 87
Evidence not_experimental

References