miRBase entry: pdu-mir-92-1

Stem-loop pdu-mir-92-1


Accession
MI0042138
Description
Platynereis dumerilii pdu-mir-92-1 precursor miRNA


Sequence


cugggugaguuaauuucaggguugucugguGGGUCGUGAUUUGUGCACUUUUGuugucacucagucaAAUUGCACUUGUCCCGGCCUGCcagcugcucacugacuucacucaagacaag
.(((((((((((......((((.(.(((((((((((.(((..(((((..(((((((.....))).)))).)))))..))).)))))))))))).))))..)))).))))))).......

Structure
------c       -    auuuca    u u           U   UU     CU    -   u 
       uggguga guua      gggu g cugguGGGUCG GAU  GUGCA  UUUG uug c
       ||||||| ||||      |||| | ||||||||||| |||  |||||  |||| ||| a
       acucacu cagu      cucg c gacCGUCCGGC CUG  CACGU  AAac gac c
gaacaga       u    ----ca    u -           C   UU     -U    u   u 


Annotation confidence Not enough data
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Genome context
JAPTHN010000001.1: 194084058-194084116 []
Clustered miRNAs
2 other miRNAs are < 10 kb from pdu-mir-92-1
Name Accession Chromosome Start End Strand Confidence




Database links

Mature pdu-miR-92-1-5p

Accession MIMAT0063644
Description Platynereis dumerilii pdu-miR-92-1-5p mature miRNA
Sequence 31 - GGGUCGUGAUUUGUGCACUUUUG - 53
Evidence not_experimental

Mature pdu-miR-92-3p

Accession MIMAT0063640
Description Platynereis dumerilii pdu-miR-92-3p mature miRNA
Sequence 68 - AAUUGCACUUGUCCCGGCCUGC - 89
Evidence not_experimental

References