miRBase entry: pdu-mir-993b

Stem-loop pdu-mir-993b


Accession
MI0042155
Description
Platynereis dumerilii pdu-mir-993b precursor miRNA


Sequence


auauucaccguagaaagcgcguucaaaauaUACCUGUAGAACCGAGCUUCUGugauuugcucugaacaacacAAACCCGGGUCUACAGGGUAUAugcagaaugcgcaugccaacaaaaaaaca
................((((((((...(((((((((((((.(((.(.((.((((..(((.......))))))))).)))).)))))).)))))))...)))))))).................

Structure
-auauucaccguagaaa        aaa       -      A   A C  C    au   cu 
                 gcgcguuc   auaUACC UGUAGA CCG G UU UGug  uug  c
                 ||||||||   ||||||| |||||| ||| | || ||||  |||  u
                 cgcguaag   uAUAUGG ACAUCU GGC C AA Acac  aac  g
acaaaaaaacaaccgua        acg       G      G   - C  -    --   aa 


Annotation confidence Not enough data
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Genome context
JAPTHN010000027.1: 3633350-3633412 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from pdu-mir-993b
Name Accession Chromosome Start End Strand Confidence




Database links

Mature pdu-miR-993b-5p

Accession MIMAT0063677
Description Platynereis dumerilii pdu-miR-993b-5p mature miRNA
Sequence 31 - UACCUGUAGAACCGAGCUUCUG - 52
Evidence not_experimental

Mature pdu-miR-993b-3p

Accession MIMAT0063678
Description Platynereis dumerilii pdu-miR-993b-3p mature miRNA
Sequence 73 - AAACCCGGGUCUACAGGGUAUA - 94
Evidence not_experimental

References