miRBase entry: pdu-mir-125

Stem-loop pdu-mir-125


Accession
MI0042157
Description
Platynereis dumerilii pdu-mir-125 precursor miRNA


Sequence


uuuccaugaccccuagagcaugccccccuuUCCCUGAGACCCUAACUUGUGAagaaaaacgucACAGGUUGAGGUCUUGGGACUagggugguauggcagacaacauaaagggggc
.........(((((....((((((.((((.((((.((((((.((((((((((.(.....).)))))))))).))))))))))..)))).)))))).............)))))..

Structure
uuuccauga     ---------agag      c    -u    U      C          a a 
         ccccu             caugcc cccu  UCCC GAGACC UAACUUGUGA g a
         |||||             |||||| ||||  |||| |||||| |||||||||| | a
         gggga             guaugg ggga  AGGG UUCUGG GUUGGACAcu c a
-------cg     aauacaacagacg      u    UC    -      A          g a 


Annotation confidence Not enough data
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Genome context
JAPTHN010000004.1: 25095717-25095771 []
Clustered miRNAs
2 other miRNAs are < 10 kb from pdu-mir-125
Name Accession Chromosome Start End Strand Confidence




Database links

Mature pdu-miR-125-5p

Accession MIMAT0063681
Description Platynereis dumerilii pdu-miR-125-5p mature miRNA
Sequence 31 - UCCCUGAGACCCUAACUUGUGA - 52
Evidence not_experimental

Mature pdu-miR-125-3p

Accession MIMAT0063682
Description Platynereis dumerilii pdu-miR-125-3p mature miRNA
Sequence 64 - ACAGGUUGAGGUCUUGGGACU - 84
Evidence not_experimental

References