Stem-loop pdu-let-7

Accession

MI0042176

Description

Platynereis dumerilii pdu-let-7 precursor miRNA

Sequence

auuucuuuggccugauguguguuaauggacUGAGGUAGUAGGUUGUAUAGUAagagaacuacaccuuuuucuggcggaCUGUACAACCUUCUAGCUUUCCccauggcgcaugaauacaucgcaacaagag
...((((.(...((((((((((((.(((...(((.(((.((((((((((((.((((((........)))))).....)))))))))))).))).)))...)))))))))......))))))...))))).

Structure

auu    u gcc      ------      a   acU   G   U            ----A      cua 
   ucuu g   ugaugu      guguua ugg   GAG UAG AGGUUGUAUAGU     agagaa   c
   |||| |   ||||||      |||||| |||   ||| ||| ||||||||||||     ||||||    
   agaa c   gcuaca      cgcggu acc   UUC AUC UCCAACAUGUCa     ucuuuu   a
--g    - aac      uaagua      -   CCU   G   U            ggcgg      ucc 

Annotation confidence Not enough data

Genome context

JAPTHN010000004.1: 25097123-25097192 []

Clustered miRNAs

2 other miRNAs are < 10 kb from pdu-let-7

Mature pdu-let-7-5p

• Accession: MIMAT0063717
• Description: Platynereis dumerilii pdu-let-7-5p mature miRNA
• Sequence: 31 - UGAGGUAGUAGGUUGUAUAGUA - 52
• Evidence: not_experimental

Mature pdu-let-7-3p

• Accession: MIMAT0063718
• Description: Platynereis dumerilii pdu-let-7-3p mature miRNA
• Sequence: 79 - CUGUACAACCUUCUAGCUUUCC - 100
• Evidence: not_experimental

References