miRBase entry: lan-mir-1994b-1

Stem-loop lan-mir-1994b-1


Accession
MI0042185
Description
Lingula anatina lan-mir-1994b-1 precursor miRNA


Sequence


cugacaaaauuaaaagaguuuguaccgacgAGGGAGUACACACUUGCCUCAUGuuguguaagagggUGAGACAGUGUGUCCUCCUUCAgcgugacaacagcgccaucugguagaauaa
...................((.(((((..(((((((.(((((((.(.(((((.((.......)).))))).)))))))).))))))).((((.......))))....))))).))...

Structure
cugacaaaauuaaaagagu  g     ------------------ac       U       U C     G  gu 
                   uu uaccg                    gAGGGAG ACACACU G CUCAU uu  g
                   || |||||                    ||||||| ||||||| | ||||| ||  u
                   aa auggu                    CUUCCUC UGUGUGA C GAGUg ga  a
----------------aau  g     cuaccgcgacaacagugcgA       C       - A     g  ga 


Annotation confidence Not enough data
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Genome context
LFEI01001236: 5797-5854 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from lan-mir-1994b-1
Name Accession Chromosome Start End Strand Confidence




Database links

Mature lan-miR-1994b-5p

Accession MIMAT0063730
Description Lingula anatina lan-miR-1994b-5p mature miRNA
Sequence 31 - AGGGAGUACACACUUGCCUCAUG - 53
Evidence not_experimental

Mature lan-miR-1994b-3p

Accession MIMAT0063729
Description Lingula anatina lan-miR-1994b-3p mature miRNA
Sequence 67 - UGAGACAGUGUGUCCUCCUUCA - 88
Evidence not_experimental

References