miRBase entry: lan-mir-1989-3

Stem-loop lan-mir-1989-3


Accession
MI0042190
Description
Lingula anatina lan-mir-1989-3 precursor miRNA


Sequence


ugugaaugugaagaauuccucugguggcccUCAGCUGUCAUGAUGCCUUCUUguuguugagacaaaGAAGCCAUUAUGACAAUUGGUGgacagcagagacacagacuagcuguuccau
...((((.......))))(((((.((.((.((((.((((((((((.(((((((((.....))).)))))).)))))))))).)))).)).)).)))))..((((.....)))).....

Structure
--ugugaaugugaagaauuc     g  g  c    C          C      -   g 
                    cucug ug cc UCAG UGUCAUGAUG CUUCUU guu u
                    ||||| || || |||| |||||||||| |||||| ||| u
                    gagac ac gG GGUU ACAGUAUUAC GAAGaa cag g
uaccuugucgaucagacaca     g  a  U    A          C      a   a 


Annotation confidence Not enough data
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Genome context
LFEI01000019: 478000-478057 []
Clustered miRNAs
2 other miRNAs are < 10 kb from lan-mir-1989-3
Name Accession Chromosome Start End Strand Confidence




Database links

Mature lan-miR-1989-5p

Accession MIMAT0063739
Description Lingula anatina lan-miR-1989-5p mature miRNA
Sequence 31 - UCAGCUGUCAUGAUGCCUUCUU - 52
Evidence not_experimental

Mature lan-miR-1989-3-3p

Accession MIMAT0063740
Description Lingula anatina lan-miR-1989-3-3p mature miRNA
Sequence 67 - GAAGCCAUUAUGACAAUUGGUG - 88
Evidence not_experimental

References