miRBase entry: lan-mir-1989-1

Stem-loop lan-mir-1989-1


Accession
MI0042192
Description
Lingula anatina lan-mir-1989-1 precursor miRNA


Sequence


aauggaugccauaguaaccuuuuugcugugUCAGCUGUCAUGAUGCCUUCUUgaagcucuacaaaGAAGACGUGAUGGCAUCUGGCCcagcgaagagaggaagagcagcagcaccag
..(((.(((....((..(((((((((((.(((((.((((((.(((.((((((...........)))))).))).)))))).))))).)))))))))).).....))....)))))).

Structure
aa   a   caua  ---aa -          u     C      G   C      gaag 
  ugg ugc    gu     c cuuuuugcug gUCAG UGUCAU AUG CUUCUU    c
  ||| |||    ||     | |||||||||| ||||| |||||| ||| ||||||    u
  acc acg    cg     g gagaagcgac CGGUC ACGGUA UGC GAAGaa    c
-g   -   acga  agaag a          C     U      G   A      acau 


Annotation confidence Not enough data
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Genome context
LFEI01000019: 478556-478612 []
Clustered miRNAs
2 other miRNAs are < 10 kb from lan-mir-1989-1
Name Accession Chromosome Start End Strand Confidence




Database links

Mature lan-miR-1989-5p

Accession MIMAT0063739
Description Lingula anatina lan-miR-1989-5p mature miRNA
Sequence 31 - UCAGCUGUCAUGAUGCCUUCUU - 52
Evidence not_experimental

Mature lan-miR-1989-1-3p

Accession MIMAT0063742
Description Lingula anatina lan-miR-1989-1-3p mature miRNA
Sequence 66 - GAAGACGUGAUGGCAUCUGGCC - 87
Evidence not_experimental

References